Pubmed search: Kim, Sanguk [Full Author Name]

50:

Kim J, Kim I, Yang JS, Shin YE, Hwang J, Park S, Choi YS, Kim S.

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Rewiring of PDZ domain-ligand interaction network contributed to eukaryotic evolution
PLoS Genet. 2012 Feb;8(2):e1002510. Epub 2012 Feb 9.
PMID: 22346764

 
49:

Kim JH, Lee ER, Jeon K, Choi HY, Lim H, Kim SJ, Chae HJ, Park SH, Kim S, Seo YR, Kim JH, Cho SG.

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Role of BI-1 (TEGT)-mediated ERK1/2 activation in mitochondria-mediated apoptosis and splenomegaly in BI-1 transgenic mice
Biochim Biophys Acta. 2012 Jan 28. [Epub ahead of print]
PMID: 22309999

 
48:

Choi DS+, Yang JS+, Choi EJ, Jang SC, Park S, Kim OY, Hwang D, Kim KP, Kim YK, Kim S*, Gho YS*.
+Joint first authors * Corresponding authors

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The protein interaction network of extracellular vesicles derived from human colorectal cancer cells
J Proteome Res. 2012 Feb 3;11(2):1144-51. Epub 2012 Jan 9.
PMID: 22149170

 
47:

Yang JS, Kim DK, Kim J, Kim S.

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Global sequence homology detection using word conservation probability
Interdisciplinary Bio Central. 2011 Oct 19. doi: 10.4051/ibc.2011.3.4.0014. [Epub]
PMID: -

 
46:

Cho NH, Cheong TC, Min JH, Wu JH, Lee SJ, Kim D, Yang JS, Kim S, Kim YK, Seong SY.

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A multifunctional core-shell nanoparticle for dendritic cell-based cancer immunotherapy
Nature Nanotechnology. 2011 Sep 11. doi: 10.1038/nnano.2011.149. [Epub ahead of print]
PMID: 21909083 [PubMed - as supplied by publisher]

 
45:

Yang JS, Nam HJ, M Seo, SK Han, Choi Y, Nam HG, Lee SJ*, Kim S*.
* Corresponding authors

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OASIS: Online Application for the Survival Analysis of Lifespan Assays Performed in Aging Research
PLoS ONE. 2011 Aug;6(8):e23525. Epub 2011 Aug 15.
PMID: 21858155 [PubMed - in process]

 
44:

Jeon J+, Jeong JH+, Baek JH+, Koo HJ, Park WH, Yang JS, Yu MH, Kim S*, Pak YK*.
+Joint first authors * Corresponding authors

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Network clustering revealed the systemic alterations of mitochondrial protein expression
PLoS Comput Biol. 2011 Jun;7(6):e1002093. Epub 2011 Jun 30.
PMID: 21738461 [PubMed - in process]

 
43:

Park S, Yang JS, Shin YE, Park J, Jang SK, Kim S.

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Protein localization as a principal feature of the etiology and comorbidity of genetic diseases
Nature Mol Syst Biol. 2011 May 24;7:494.
PMID: 21613983 [PubMed - in process]

 
42:

Lee J, Lee H, Kim J, Lee S, Kim DH, Kim S, Hwang I.

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Both the Hydrophobicity and a Positively Charged Region Flanking the C-Terminal Region of the Transmembrane Domain of Signal-Anchored Proteins Play Critical Roles in Determining Their Targeting Specificity to the Endoplasmic Reticulum or Endosymbiotic Organelles in Arabidopsis Cells
Plant Cell. 2011 Apr;23(4):1588-607. Epub 2011 Apr 22.
PMID: 21515817 [PubMed - as supplied by publisher]

 
41:

Jeon J, Nam HJ, Choi Y, Yang JS, Hwang J, Kim S.

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Molecular evolution of protein conformational changes revealed by a network of evolutionarily-coupled residues
Mol Biol Evol. 2011 Sep;28(9):2675-85. Epub 2011 Apr 6.
PMID: 21470969 [PubMed - as supplied by publisher]

 
40:

Yang JS+, Kim JT+, Jeon J, Park HS, Kang GH, Park KS, Lee HK, Kim S*, Cho YM*.
+Joint first authors * Corresponding authors

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Changes in Hepatic Gene Expression upon Oral Administration of Taurine-Conjugated Ursodeoxycholic Acid in ob/ob Mice
PLoS One. 2010 Nov 5;5(11):e13858
PMID: 21079772 [PubMed - in process]

 
39:

Kim JK, Lim S, Kim J, Kim S, Kim JH, Ryu SH, Suh PG.

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Subtype-specific roles of phospholipase C-¥â via differential interactions with PDZ domain proteins
Adv Enzyme Regul. 2011;51(1):138-51. Epub 2010 Oct 28.
PMID: 21035486 [PubMed - as supplied by publisher]

 
38:

Choi YS+, Han SK+, Kim J, Yang JS, Jeon J, Ryu SH, Kim S.
+Joint first authors

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ConPlex: a sever for the evolutionary conservation analysis of protein complex structures
Nucleic Acids Res. 2010 Jul;38(Web Server issue):W450-6. Epub 2010 Apr 30.
PMID: 20435678 [PubMed - as supplied by publisher]

 
37:

Cho BA, Cho NH, Min CK, Kim SY, Yang JS, Lee JR, Jung JW, Lee WC, Kim K, Lee MK, Kim S, Kim KP, Seong SY, Choi MS, Kim IS.

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Global gene expression profile of Orientia tsutsugamushi.
Proteomics. 2010 Feb 22: 10(8):1699-1715
PMID: 20186754 [PubMed - as supplied by publisher]

 
36:

Lee GH, Ahn T, Kim DS, Park SJ, Lee YC, Yoo WH, Jung SJ, Yang JS, Kim S, Muhlrad A, Chae SW, Kim HR, Chae HJ.

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Bax Inhibitor-1 increases cell adhesion through actin polymerization: The involvement of calcium and actin binding.
Mol Cell Biol. 2010 Apr:30(7):1800-1813.

PMID: 20123969 [PubMed - as supplied by publisher]

 
35:

Nam HJ, Jeon J, Kim S.

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Bioinformatic approaches for the structure and function of membrane proteins.
BMB Rep. 2009 Nov 30;42(11):697-704.
PMID: 19944009 [PubMed - in process]

 
34:

Jeon J, Yang JS, Kim S.

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Integration of evolutionary features for the identification of functionally important residues in major facilitator superfamily transporters.
PLoS Comput Biol. 2009 Oct;5(10):e1000522. Epub 2009 Oct 2.
PMID: 19798434 [PubMed - in process]

 
33:

Park S, Yang JS, Jang SK, Kim S.

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Construction of functional interaction networks through consensus localization predictions of the human proteome.
J Proteome Res. 2009 Jul;8(7):3367-76.
PMID: 19415893 [PubMed - as supplied by publisher]

 
32:

Choi YS, Yang JS, Choi Y, Ryu SH, Kim S.

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Evolutionary conservation in multiple faces of protein interaction.
Proteins. 2009 Feb 27; 77(1):14-25.
PMID: 19350617 [PubMed - as supplied by publisher]

 
31:

Min CK, Bang SY, Cho BA, Choi YH, Yang JS, Lee SH, Seong SY, Kim KW, Kim S, Jung JU, Choi MS, Kim IS, Cho NH.

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Role of Amphipathic Helix of a Herpesviral Protein in Membrane Deformation and T Cell Receptor Downregulation.
PLoS Pathog. 2008 Nov;4(11):e1000209. Epub 2008 Nov 21.

PMID: 19023411 [PubMed - as supplied by publisher]

 
30:

Lee DW+, Kim JK+, Lee S, Choi S, Kim S*, Hwang I*.
+Joint first authors * Corresponding
authors

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Arabidopsis nuclear-encoded plastid transit peptides contain multiple sequence subgroups with distinctive chloroplast-targeting sequence motifs.
Plant Cell. 2008 Jun;20(6):1603-1622.
PMID: 18552198 [PubMed - indexed for MEDLINE]

 
29:

Min C, Yang JS, Kim S, Choi M, Kim I, Cho N.

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Genome-based construction of the metabolic pathways of Orientia tsutsugamushi and comparative analysis within the Rickettsiales order.
Comparative and Functional Genomics. 2008:623145
PMID: 18528528 [PubMed - in process]

 
28:

Lim DW, Kim J, Kim S, Carthew RW, Lee YS.

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Functional analysis of dicer-2 missense mutations in the siRNA pathway of Drosophila.
Biochem Biophys Res Commun. 2008 Jul 4;
371(3):525-30. Epub 2008 Apr 30.
PMID: 18454937 [PubMed - as supplied by publisher]

 
27:

Kim YY, Kim DY, Shim D, Song WY, Lee J, Schroeder JI, Kim S, Moran N, Lee Y.

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Expression of the Novel Wheat Gene TM20 Confers Enhanced Cadmium Tolerance to Bakers' Yeast.
J Biol Chem. 2008 Jun 6;
283(23):15893-15902. Epub 2008 Apr 14.
PMID: 18411273 [PubMed - as supplied by publisher]

 
26:

Kim HR, Lee GH, Ha KC, Ahn T, Lee BJ, Cho SG, Kim S, Seo YR, Shin YJ, Chae SW, Reed JC, Chae HJ.

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Bax Inhibitor-1 Is a pH-dependent Regulator of Ca2+ Channel Activity in the Endoplasmic Reticulum.
J Biol Chem. 2008 Jun 6;
283(23):15946-15955. Epub 2008 Mar 31.
PMID: 18378668 [PubMed - as supplied by publisher]

 
25:

Page RC, Kim S, Cross TA.

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Transmembrane helix uniformity examined by spectral mapping of torsion angles.
Structure 2008. May 07;16: 787-797
PMID: 18462683 [PubMed - in process]

 
24:

Choi S*, Jeon J*, Yang JS, Kim S.
*Joint first authors

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Common occurrence of internal repeat symmetry in membrane proteins
Proteins. 2008 Apr;71(1):68-80.
PMID: 17932930 [PubMed - indexed for MEDLINE]

 
23:

Gorman PM, Kim S, Guo M, Melnyk R, McLaurin J, Fraser PE, Bowie JU, Chakrabartty A.

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Dimerization of the transmembrane domain of amyloid precursor proteins and familial Alzheimer¡¯s disease mutants.
BMC Neurosci. 2008 Jan 30;9(1):17
PMID: 18234110 [PubMed - indexed for MEDLINE]

 
22:

Plotkowski ML, Kim S, Phillips ML, Partridge AW, Deber CM, Bowie JU.

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The transmembrane domain of Myelin Protein Zero can form dimers: Possible implications for Myelin construction.
Biochemistry. 2007 Oct 30;
46(43):12164-73. Epub 2007 Oct 4.
PMID: 17915947 [PubMed - in process]

 
21:

Kim YK, Park HW, Yang JS, Oh SY, Chang YS, Shin ES, Lee JE, Kim S*, Gho YS, Cho SH, Min KU, Kim YY.
*Corresponding
author

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Association and functional relevance of E237G, a polymorphism of the high-affinity immunoglobulin E-receptor ¥â chain gene, to airway hyper-responsiveness
Clinical & Experimental Allergy 2007 Apr;37(4):592-598.
PMID: 17430357 [PubMed - in process]

 
20:

Barwe SP*, Kim S*, Rajasekaran SA, Bowie JU, Rajasekaran AK.
*Joint first authors

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Janus model of the Na,K-ATPase ¥â-subunit transmembrane domain: Distinct faces mediate ¥á/¥â assembly and ¥â-¥â homo-oligomerization
J Mol Biol.
2007 Jan 19;365(3):706-14. Epub 2006 Oct 31.
PMID: 17078968 [PubMed - in process]

 
19:

Jeong MY*, Kim S*, Yun CW, Choi YJ, Cho SG.
*Joint first authors

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Engineering a de novo internal disulfide bridge to improve the thermal stability of xylanase from Bacillus stearothermophilus No. 236.
J Biotechnol. 2007 Jan1;127(2):300-9. Epub 2006 Jul 16.
PMID: 16919348 [PubMed - as supplied by publisher]

 
18:

Oberai A, Ihm Y, Kim S, Bowie JU.

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  A limited universe of membrane protein families and folds.
Protein Sci. 2006 Jul;15(7):1723-34.
PMID: 16815920 [PubMed - in process]
 
17:

Go MY, Kim S, Partridge AW, Melnyk RA, Rath A, Deber CM, Mogridge J.

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Self-association of the Transmembrane Domain of an Anthrax Toxin Receptor.
J Mol Biol. 2006 Jun 30;360(1):145-56. Epub 2006 May 15.
PMID: 16756998 [PubMed - as supplied by publisher]

 
16:

Choi Y, Yang J, Ryu SH, Kim S.

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  Retrieving protein domain encoding DNA sequences automatically through database cross-referencing
Bioinformatics and Biosystems 2006 Jun 1;1:95-98.
 
15:

Lee DW, Lee S, Lee GJ, Lee KH, Kim S, Cheong GW, Hwang I.

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Functional characterization of sequence motifs in the transit Peptide of Arabidopsis small subunit of rubisco.
Plant Physiol. 2006 Feb;140(2):466-83. Epub 2005 Dec 29.
PMID: 16384899 [PubMed - in process]

 
14:

Kim S, Jeon TJ, Oberai A, Yang D, Schmidt JJ, Bowie JU.

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Transmembrane glycine zippers: physiological and pathological roles in membrane proteins.
Proc Natl Acad Sci U S A. 2005 Oct 4;102(40):14278-83. Epub 2005 Sep 22.
PMID: 16179394 [PubMed - in process]

 
13:

Edwards MD*, Li Y*, Kim S*, Miller S, Bartlett W, Black S, Dennison S, Iscla I, Blount P, Bowie JU, Booth IR.
*Joint first authors

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Pivotal role of the glycine-rich TM3 helix in gating the MscS mechanosensitive channel.
Nat Struct Mol Biol. 2005 Feb;12(2):113-9. Epub 2005 Jan 23.
PMID: 15665866 [PubMed - indexed for MEDLINE]

Highlighted on NSMB
  
News and Views 2005; 12(2): 104-105.

 
12:

Partridge AW, Liu S, Kim S, Bowie JU, Ginsberg MH.

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Transmembrane domain helix packing stabilizes integrin alphaIIbbeta3 in the low affinity state.
J Biol Chem. 2005 Feb 25;280(8):7294-300. Epub 2004 Dec 10.
PMID: 15591321 [PubMed - indexed for MEDLINE]

 
11:

Kim S, Chamberlain AK, Bowie JU.

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A model of the closed form of the nicotinic acetylcholine receptor m2 channel pore.
Biophys J. 2004 Aug;87(2):792-9.
PMID: 15298888 [PubMed - indexed for MEDLINE]

 
10:

Kim S, Cross TA.

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2D solid state NMR spectral simulation of 3(10), alpha, and pi-helices.
J Magn Reson. 2004 Jun;168(2):187-93.
PMID: 15140426 [PubMed - indexed for MEDLINE]

 
09:

Chamberlain AK, Lee Y, Kim S, Bowie JU.

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Snorkeling preferences foster an amino acid composition bias in transmembrane helices.
J Mol Biol. 2004 May 28;339(2):471-9.
PMID: 15136048 [PubMed - indexed for MEDLINE]

 
08:

Kim S, Chamberlain AK, Bowie JU.

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Membrane channel structure of Helicobacter pylori vacuolating toxin: role of multiple GXXXG motifs in cylindrical channels.
Proc Natl Acad Sci U S A. 2004 Apr 20;101(16):5988-91. Epub 2004 Apr 5.
PMID: 15067113 [PubMed - indexed for MEDLINE]

 
07:

Melnyk RA*, Kim S*, Curran AR*, Engelman DM, Bowie JU, Deber CM.
*Joint first authors

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The affinity of GXXXG motifs in transmembrane helix-helix interactions is modulated by long-range communication.
J Biol Chem. 2004 Apr 16;279(16):16591-7. Epub 2004 Feb 5.
PMID: 14766751 [PubMed - indexed for MEDLINE]

 
06:

Kim S*, Chamberlain AK*, Bowie JU.
*Joint first authors

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A simple method for modeling transmembrane helix oligomers.
J Mol Biol. 2003 Jun 13;329(4):831-40.
PMID: 12787681 [PubMed - indexed for MEDLINE]

 
05:

Nishimura K*, Kim S*, Zhang L, Cross TA.
*Joint first authors

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The closed state of a H+ channel helical bundle combining precise orientational and distance restraints from solid state NMR.
Biochemistry. 2002 Nov 5;41(44):13170-7.
PMID: 12403618 [PubMed - indexed for MEDLINE]

 
04:

Kim S, Cross TA.

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Uniformity, ideality, and hydrogen bonds in transmembrane alpha-helices.
Biophys J. 2002 Oct;83(4):2084-95.
PMID: 12324426 [PubMed - indexed for MEDLINE]

 
03:

Wang J, Kim S, Kovacs F, Cross TA.

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Structure of the transmembrane region of the M2 protein H(+) channel.
Protein Sci. 2001 Nov;10(11):2241-50.
PMID: 11604531 [PubMed - indexed for MEDLINE]    
Cover Article

 
02:

Kim S, Quine JR, Cross TA.

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Complete cross-validation and R-factor calculation of a solid-state NMR derived structure.
J Am Chem Soc. 2001 Aug 1;123(30):7292-8.
PMID: 11472156 [PubMed]

 
01:

Wang J, Denny J, Tian C, Kim S, Mo Y, Kovacs F, Song Z, Nishimura K, Gan Z, Fu R, Quine JR, Cross TA.

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Imaging membrane protein helical wheels.
J Magn Reson. 2000 May;144(1):162-7.
PMID: 10783287 [PubMed - indexed for MEDLINE]    
Cover Article