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Profile

Profile.
Name	Tae-Kyung Kim
Organization	Dept of Life Sciences
Telephone	054-279-2293
E-mail	tkkim@postech.ac.kr
Homepage	https://nepilab.com/

Education

1994.09 ~ 2000.11 RUTGERS, THE STATE UNIVERSITY OF NEW JERSEY (통합-Eukaryotic Gene Regulation)
1987.03 ~ 1993.02 고려대학교 (학사-생물학)

Career

2010.01 ~ 2018.09 : UNIV. OF TEXAS SOUTHWESTERN MEDICAL CENTER DEPT. OF NEUROSCIENCE
2002.01 ~ 2009.12 : HARVARD MEDICAL SCHOOL DEPT. OF NEUROBIOLOGY
2000.12 ~ 2001.12 : RUTGERS THE STATE UNIV. NEW JERS MEDICAL SCHOOL

Profession

Molecular biology, molecular neuroscience, genomics, epigenetics, biochemistry, gene regulation,

International

Hippocampal subfield transcriptome analysis in schizophrenia psychosis, MOLECULAR PSYCHIATRY, , , - (2020)
Emerging themes in neuronal activity-dependent gene expression., MOLECULAR AND CELLULAR NEUROSCIENCE, , 87, 27-34 (2018)
PASNet: pathway-associated sparse deep neural network for prognosis prediction from high-throughput data, BMC Bioinformatics, , 19, - (2018)
HDAC5 and Its Target Gene, Npas4, Function in the Nucleus Accumbens to Regulate Cocaine-Conditioned Behaviors, NEURON, , 96, 130- (2017)
An Intrinsic Transcriptional Program Underlying Synaptic Scaling during Activity Suppression, Cell Reports, , 18, 1512-1526 (2017)
UV-RNA Immunoprecipitation (UV-RIP) Protocol in Neurons, Methods in molecular biology (Clifton, N.J.), , , - (2017)
Diverse regulatory interactions of long noncoding RNAs, CURRENT OPINION IN GENETICS & DEVELOPMENT, , 36, 73-82 (2016)
Stimulus-specific combinatorial functionality of neuronal c-fos enhancers, NATURE NEUROSCIENCE, , 19, 75- (2016)
Genomic Views of Transcriptional Enhancers: Essential Determinants of Cellular Identity and Activity-Dependent Responses in the CNS., JOURNAL OF NEUROSCIENCE, , 35, 13819-13826 (2015)
Architectural and Functional Commonalities between Enhancers and Promoters. , CELL, , 162, 948-959 (2015)
Enhancer RNAs: a class of long noncoding RNAs synthesized at enhancers, Cold Spring Harbor Perspectives in Biology, , 7, - (2015)
ChIP-seq and RNA-seq methods to study circadian control of transcription in mammals., METHODS IN ENZYMOLOGY, , 551, 285-321 (2015)
Enhancer RNA facilitates NELF release from immediate early genes, MOLECULAR CELL, , 56, 29-42 (2014)
Emerging epigenetic mechanisms of long non-coding RNAs, NEUROSCIENCE, , 264, 25-38 (2014)
SET7/9 methylation of the pluripotency factor LIN28A is a nucleolar localization mechanism that blocks let-7 biogenesis in human ESCs., Cell Stem Cell, , 15, 735-749 (2014)
Usf1, a suppressor of the circadian Clock mutant, reveals the nature of the DNA-binding of the CLOCK:BMAL1 complex in mice, eLife, , 2, - (2013)
Systematic evaluation of factors influencing ChIP-seq fidelity, NATURE METHODS, , 9, 609- (2012)
Bhlhb5 and Prdm8 form a repressor complex involved in neuronal circuit assembly, NEURON, , 73, 292-303 (2012)
Transcriptional architecture and chromatin landscape of the core circadian clock in mammals., SCIENCE, , 338, 349-354 (2012)
Genome-wide identification of calcium-response factor (CaRF) binding sites predicts a role in regulation of neuronal signaling pathways, PLoS One, , 5, - (2010)
Widespread transcription at neuronal activity-regulated enhancers, NATURE, , 465, 182-187 (2010)
The Angelman Syndrome protein Ube3A regulates synapse development by ubiquitinating arc, CELL, , 140, 704-716 (2010)
A retrograde neuronal survival response: target-derived neurotrophins regulate MEF2D and bcl-w, JOURNAL OF NEUROSCIENCE, , 29, 6700-6709 (2009)
Mef2-mediated transcription of the miR379-410 cluster regulates activity-dependent dendritogenesis by fine-tuning Pumilio2 protein levels, EMBO JOURNAL, , 28, 697-710 (2009)
Genome-wide analysis of MEF2 transcriptional program reveals synaptic target genes and neuronal activity-dependent polyadenylation site selection, NEURON, , 60, 1022-1038 (2008)
Activity-dependent regulation of inhibitory synapse development by Npas4, NATURE, , 455, 1198-1204 (2008)
Identifying autism loci and genes by tracing recent shared ancestry, SCIENCE, , 321, 218-223 (2008)
Genome-wide maps of chromatin state in pluripotent and lineage-committed cells, NATURE, , 448, 553-560 (2007)
START: an automated tool for serial analysis of chromatin occupancy data, BIOINFORMATICS, , 22, 999-1001 (2006)
Activity-dependent regulation of MEF2 transcription factors suppresses excitatory synapse number, SCIENCE, , 311, 1008-1012 (2006)
PARP-1 determines specificity in a retinoid signaling pathway via direct modulation of mediator, MOLECULAR CELL, , 18, 83-96 (2005)
A downstream element in the human beta-globin promoter: evidence of extended sequence-specific transcription factor IID contacts, PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA-PHYSICAL SCIENCES, , 97, 7172-7177 (2000)
Mechanism of ATP-dependent promoter melting by transcription factor IIH, SCIENCE, , 288, 1418-1421 (2000)
A protein phosphatase functions to recycle RNA polymerase II, GENES & DEVELOPMENT, , 13, 1540-1552 (1999)
The RNA polymerase II general transcription factors: past, present, and future, COLD SPRING HARBOR SYMPOSIA ON QUANTITATIVE BIOLOGY, , 63, 83-103 (1998)
Trajectory of DNA in the RNA polymerase II transcription preinitiation complex, PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA-PHYSICAL SCIENCES, , 94, 122268-12273 (1997)
High-resolution mapping of nucleoprotein complexes by site-specific protein-DNA photocrosslinking: organization of the human TBP-TFIIA-TFIIB-DNA quaternary complex, PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA-PHYSICAL SCIENCES, , 93, 10620-10625 (1996)

Domestic Journal Papers

General Journal Papers

Conference Proceedings

Invited Talk or Presentations

Books

Research Activities

김태경_신규부임교수 기자재지원(1차_대학), 포항공과대학교 (2018-2019)
김태경_신규부임교수 기자재지원(1차_학과), 포항공과대학교 (2018-2019)
김태경_신규부임교수 연구비지원(1차_대학), 포항공과대학교 (2018-2019)
EPIGENETIC FUNCTION OF ENHANCER TRANSCRIPTION IN NEURODEGENERATIVE DISEASES, 재단법인한국연구재단 (2019-2020)
[삭제]신규부임교수 연구비지원(2차_대학), 포항공과대학교 (2019-2020)
김태경_신규부임교수 연구비지원(2차_대학), 포항공과대학교 (2019-2020)
김태경_신규부임교수 기자재지원(2차_대학), 포항공과대학교 (2019-2020)
김태경_신규부임교수 기자재지원(2차_학과), 포항공과대학교 (2019-2020)
EPIGENOMIC ANALYSIS OF MICROPLASTIC-INDUCED TOXICITY IN THE GENE REGULATORY NETWORK, 한국생명공학연구원 (2019-2020)
학생인건비통합관리과제, 포항공대산학협력단 (2020-2040)
EPIGENOMIC ANALYSIS OF MICROPLASTIC-INDUCED TOXICITY IN THE GENE REGULATORY NETWORK, 한국생명공학연구원 (2020-2020)
인핸서 전사체의 퇴행성 신경질환에 관련된 후성유전체적 기능, 재단법인한국연구재단 (2020-2021)
김태경_신규부임교수 기자재지원(3차_대학), 포항공과대학교 (2020-2021)
김태경_신규부임교수 연구비지원(3차_대학), 포항공과대학교 (2020-2021)
[BSRI-CW]신진 과학자 초청 미니 심포지움, 포항공과대학교 (2020-2021)
4.18309 이월과제, 한국생명공학연구원 (2020-2020)
4.17500 이월과제, 재단법인한국연구재단 (2020-2021)
뇌-마이크로바이옴 기능적 상호작용의 후성유전학적 분석, 재단법인한국연구재단 (2020-2021)
미세플라스틱에 의한 유전자 발현조절 변이의 후성유전학적 분석, 한국생명공학연구원 (2021-2021)
인핸서 전사체의 퇴행성 신경질환에 관련된 후성유전체적 기능, 재단법인한국연구재단 (2021-2022)
4.19343_이월과제, 한국생명공학연구원 (2021-2021)
4.0019344_이월과제, 재단법인한국연구재단 (2021-2022)
새로운 CDK7 억제 화합물이 전사에 미치는 영향 연구, 주식회사 큐리언트(Qurient Co.,Ltd.) (2021-2022)
유전체 활동전위에 기반한 기억흔적의 추적 및 재구성, 재단법인 삼성미래기술육성재단 (2021-2026)
뇌-마이크로바이옴 기능적 상호작용의 후성유전학적 분석, 재단법인한국연구재단 (2022-2022)
OPTIMIZATION OF EPIGENOME DATA ANALYSIS SYSTEM AND DEVELOPMENT OF PRACTICAL OPEN ANALYSIS SYSTEM, 재단법인한국연구재단 (2022-2022)
미세플라스틱에 의한 유전자 발현조절 변이의 후성유전학적 분석, 한국생명공학연구원 (2022-2022)
4.0020925_이월과제, 재단법인한국연구재단 (2022-2022)
4.0021261_이월과제, 재단법인한국연구재단 (2022-2022)
새로운 CDK7 억제 화합물이 전사에 미치는 영향 연구, 주식회사 큐리언트(Qurient Co.,Ltd.) (2022-2023)
EPIGENOMIC ANALYSIS OF THE GUT-BRAIN AXIS, 재단법인한국연구재단 (2023-2023)
EPIGENOMIC ANALYSIS OF MICROPLASTIC-INDUCED TOXICITY IN THE GENE REGULATORY NETWORK, 한국생명공학연구원 (2023-2023)
4.0023116/4.0023901_이월과제, 재단법인한국연구재단 (2023-2023)
BIOLOGICAL RESEARCH INFORMATION CENTER (BRIC), 재단법인한국연구재단 (2023-2024)
4.0023659_이월과제, 포항공대산학협력단 (2023-2024)
생물학연구정보센터(BRIC) 부서운영비 과제(2022), 포항공대산학협력단 (2023-2024)
INVESTIGATION OF GENE REGULATORY FUNCTION OF ERNA IN BRAIN THROUGH A NEW METHODOLOGICAL APPROACH, 재단법인한국연구재단 (2023-2024)
나고야의정서 인식도 조사, 한국생명공학연구원 (2023-2023)
새로운 CDK7 억제 화합물이 전사에 미치는 영향 연구, 주식회사 큐리언트(Qurient Co.,Ltd.) (2023-2024)